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Intron Name: Anas_platyrhynchos_platyrhynchos_16_623894_630672_R

Intron Information:

Intron Rank:

145908

Intron Class:

major

Intron Phase:

Intron Coordinates:

623894 - 630672

Intron Length:

6779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTCTCTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

30.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

83.7

0.76

0.8

81.2

29.2

Minor 5ss

40.5

-1.1

3.2

57.3

47.4

Minor BPS

65.6

0.57

1.7

84.73

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042000

621977 - 630722

8746