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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6241029_6241151_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6241029 - 6241151

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCAATCTGG

5'SS Class:

major

3'SS Sequence:

TGGGGGCTGAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGCCAT

U12 Branch Point Sequence:

GGGGGCTGAAAG

Flanking Amino Acid:

TATALVCDDVERFMPGLLRA

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.4

47.3

48.1

Major BPS

54.4

0.11

1.4

64.4

42.8

Major PPT

46.9

-0.1

1.2

40.4

43.3

Minor 5ss

32.6

-2

38.3

46.7

Minor BPS

40.5

-0.8

39.07

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041442

6238970 - 6243260

4291