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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6242210_6243026_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6242210 - 6243026

Intron Length:

817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGGTTGGT

5'SS Class:

weak_major

3'SS Sequence:

ATATAACGATGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

TCATATATAACG

Flanking Amino Acid:

GLCHLPSGGSMDDFSSPYII

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.1

49.3

41.4

Major BPS

69.1

0.48

32.1

Major PPT

43.9

-0.3

1.7

45.7

Minor 5ss

30.6

-2.2

3.6

47.2

Minor BPS

49.6

-0.1

1.9

58.1

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019364

6238970 - 6248993

10024