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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6244262_6244762_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6244262 - 6244762

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTTGTGTTCACA

Flanking Amino Acid:

VLALIFNILKGYNFSADSIK

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.8

35.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

74.7

0.56

68.5

42.1

Minor 5ss

28.6

-2.5

3.4

37.5

47.2

Minor BPS

47.8

-0.1

2.5

70.02

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019364

6238970 - 6248993

10024

ENSAPLT00000008526

6238970 - 6248993

10024