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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6290422_6290838_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6290422 - 6290838

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCAGCCGAA

5'SS Class:

weak_major

3'SS Sequence:

TATCCCTGCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGGTAT

U12 Branch Point Sequence:

TATCCCTGCAGA

Flanking Amino Acid:

GRRRAVQRQNDAVSHRGISG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.4

51.3

42.8

Major BPS

47.6

-0.1

1.5

46.8

46.7

Major PPT

49.3

-0

1.7

56.9

38.4

Minor 5ss

31.9

-2.1

4.5

49.2

47.7

Minor BPS

46.7

-0.2

2.2

63.14

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008662

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009007

6290215 - 6301981

11767