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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6320308_6320997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6320308 - 6320997

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

GGCCTCTGAACA

Flanking Amino Acid:

IEAEDNMNCQMSNITVTYRD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

35.1

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

81.3

0.7

0.9

72.8

41.9

Minor 5ss

34.3

-1.8

3.4

50.5

Minor BPS

53.6

0.11

1.5

59.24

39.9

Associated Gene:

Gene:

SNRPD3

Ensembl Gene ID:

ENSAPLG00000008670

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009023

6319160 - 6321147

1988