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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6348181_6349710_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6348181 - 6349710

Intron Length:

1530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAAAA

5'SS Class:

major

3'SS Sequence:

TTCTTACAATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAGCG

Flanking Amino Acid:

LPTDTAVAVQVAALHKRIEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

70.4

35.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.3

0.5

37.3

Minor 5ss

31.1

-2.2

3.2

39.8

45.8

Minor BPS

53.3

-0

1.9

67.66

40.3

Associated Gene:

Gene:

UPB1

Ensembl Gene ID:

ENSAPLG00000008782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039705

6345086 - 6350584

5499

ENSAPLT00000009148

6331715 - 6350584

18870