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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6416818_6419220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6416818 - 6419220

Intron Length:

2403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TATTCCTGATTT

Flanking Amino Acid:

AESVGIKSTLDINEMVRTER

Intron Amino Acid Position:

1092

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

0.65

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

64.7

0.54

1.7

82.35

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009677

6416728 - 6466076

49349