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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6449434_6456036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6449434 - 6456036

Intron Length:

6603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

ACTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAC

U12 Branch Point Sequence:

TTACGTGGAATT

Flanking Amino Acid:

HDNLIISDLENTVKKLQDQK

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

72.7

0.56

0.9

63.4

35.2

Major PPT

87.3

0.84

0.7

84.9

29.1

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

41.6

-0.5

2.3

62.74

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009677

6416728 - 6466076

49349