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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6527868_6528379_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6527868 - 6528379

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

ATTTCCTTCATT

Flanking Amino Acid:

YLSHLEALLLPMKPLKAAAT

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.1

37.8

Major BPS

76.8

0.67

40.9

Major PPT

83.8

0.76

0.8

81.5

28.9

Minor 5ss

42.2

-0.9

2.9

56.1

42.2

Minor BPS

75.1

0.87

1.7

90.25

33.9

Associated Gene:

Gene:

BCR

Ensembl Gene ID:

ENSAPLG00000009133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009520

6491595 - 6586112

94518