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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6590370_6593876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6590370 - 6593876

Intron Length:

3507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATGTTAA

5'SS Class:

major

3'SS Sequence:

CACGTTTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

TTGCCTATACCC

Flanking Amino Acid:

MAQIGTGNLIITRGCC*

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

34.5

Major BPS

74.1

0.6

38.9

Major PPT

68.5

0.42

64.5

41.1

Minor 5ss

47.8

-0.2

2.5

62.7

43.1

Minor BPS

-0

1.9

64.47

41.2

Associated Gene:

Gene:

RAB36

Ensembl Gene ID:

ENSAPLG00000008936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009308

6590350 - 6604838

14489