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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6593997_6594537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6593997 - 6594537

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAA

U12 Branch Point Sequence:

GTTGCAAAAACG

Flanking Amino Acid:

AEYWSVSAKTGENVNEFFSR

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

52.9

0.07

1.1

59.3

35.9

Major PPT

79.4

0.66

0.8

72.8

37.5

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

43.1

-0.6

2.2

54.33

Associated Gene:

Gene:

RAB36

Ensembl Gene ID:

ENSAPLG00000008936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043966

6593578 - 6603637

10060

ENSAPLT00000009308

6590350 - 6604838

14489