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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6594629_6595270_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6594629 - 6595270

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGGTAAGC

5'SS Class:

weak_major

3'SS Sequence:

GGTATTTACTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATCTTAAAG

Flanking Amino Acid:

IFLVGTKKDLSDAVCERTEI

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.1

51.4

39.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.8

0.42

44.3

Minor 5ss

27.2

-2.6

31.4

37.2

Minor BPS

69.2

0.46

1.5

73.28

38.8

Associated Gene:

Gene:

RAB36

Ensembl Gene ID:

ENSAPLG00000008936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009308

6590350 - 6604838

14489

ENSAPLT00000043966

6593578 - 6603637

10060