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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6597000_6597596_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6597000 - 6597596

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGAACA

5'SS Class:

major

3'SS Sequence:

TCTTTTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTACTTAATT

Flanking Amino Acid:

IASAYYRGAEVIITVFDLTD

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

70.4

35.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

89.5

0.89

0.7

85.1

27.9

Minor 5ss

27.9

-2.5

2.7

24.7

36.3

Minor BPS

1.15

1.3

97.18

Associated Gene:

Gene:

RAB36

Ensembl Gene ID:

ENSAPLG00000008936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043966

6593578 - 6603637

10060

ENSAPLT00000009308

6590350 - 6604838

14489