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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6599914_6600419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6599914 - 6600419

Intron Length:

506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TTCTTCACTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTTTCTTCACT

Flanking Amino Acid:

LYVGKTSLINRFCKDNFNRD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

83.5

0.75

0.8

78.2

28.9

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

78.1

0.97

1.6

95.32

31.5

Associated Gene:

Gene:

RAB36

Ensembl Gene ID:

ENSAPLG00000008936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009308

6590350 - 6604838

14489

ENSAPLT00000043966

6593578 - 6603637

10060