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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6600486_6603563_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6600486 - 6603563

Intron Length:

3078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

ATATTTCTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATATTTCTAACA

Flanking Amino Acid:

TACQQSAGTVGLKISKVVVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

43.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

75.2

0.57

70.7

39.2

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

60.4

0.32

1.6

70.95

34.7

Associated Gene:

Gene:

RAB36

Ensembl Gene ID:

ENSAPLG00000008936

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043966

6593578 - 6603637

10060

ENSAPLT00000009308

6590350 - 6604838

14489