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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6610256_6610452_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6610256 - 6610452

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTAGGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

GCATAGTTAAAT

Flanking Amino Acid:

LCIMAMHNVGRVDTKGSNTC

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

87.1

Major BPS

71.8

0.54

1.2

32.5

Major PPT

48.6

-0

1.2

45.3

Minor 5ss

37.9

-1.4

3.1

50.4

46.1

Minor BPS

46.5

-0.1

2.3

64.07

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008928

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009284

6609215 - 6610489

1275