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Intron Name: Anas_platyrhynchos_platyrhynchos_16_667866_669354_F

Intron Information:

Intron Rank:

146234

Intron Class:

major

Intron Phase:

Intron Coordinates:

667866 - 669354

Intron Length:

1489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTACCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

CTTCCCTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

80.9

0.69

0.8

31.3

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

70.7

0.73

1.7

85.35

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039567

667216 - 669780

2565