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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6707718_6708269_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6707718 - 6708269

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTCAGGTAA

5'SS Class:

weak_major

3'SS Sequence:

GAAGTACAGAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGGCTTTTAATT

Flanking Amino Acid:

KEDIPDEKDDDTEKIEITSE

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.14

1.3

56.5

39.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

44.5

-0.3

1.2

34.8

39.3

Minor 5ss

32.7

-2

3.2

34.7

42.4

Minor BPS

64.6

0.54

1.2

73.32

38.1

Associated Gene:

Gene:

SLC5A1

Ensembl Gene ID:

ENSAPLG00000007944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006602

6707179 - 6735063

27885