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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6708368_6708696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6708368 - 6708696

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

FMTKPIPDVHLYRLCWSLRN

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

24.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.9

0.63

74.9

38.8

Minor 5ss

38.7

-1.3

41.5

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

SLC5A1

Ensembl Gene ID:

ENSAPLG00000007944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044964

6707179 - 6739293

32115

ENSAPLT00000008275

6707179 - 6736946

29768

ENSAPLT00000006602

6707179 - 6735063

27885