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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6716730_6721714_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6716730 - 6721714

Intron Length:

4985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTATCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCATTTTTATCT

Flanking Amino Acid:

LIVYIFTKISADIFSGAIFI

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.83

0.7

85.8

28.4

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

62.4

0.47

1.6

75.72

41.5

Associated Gene:

Gene:

SLC5A1

Ensembl Gene ID:

ENSAPLG00000007944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044964

6707179 - 6739293

32115

ENSAPLT00000008275

6707179 - 6736946

29768

ENSAPLT00000006602

6707179 - 6735063

27885