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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6811596_6814343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6811596 - 6814343

Intron Length:

2748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGACT

5'SS Class:

strong_major

3'SS Sequence:

CTGATGCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTGCCATTAATG

Flanking Amino Acid:

TPTYMDSPRKDGAFFMDFVR

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

35.4

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

70.8

0.47

66.1

40.7

Minor 5ss

34.3

-1.8

3.3

49.5

46.5

Minor BPS

61.4

0.22

1.7

66.18

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007663

6798098 - 6821847

23750