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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6837767_6838878_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6837767 - 6838878

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CATTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

AGATCTTTCATT

Flanking Amino Acid:

VTQKVEFAGIRWSSAPLLPW

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.67

0.8

73.6

30.9

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

57.2

0.31

1.7

71.73

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044986

6837718 - 6842699

4982