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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6839679_6840449_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6839679 - 6840449

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAA

U12 Branch Point Sequence:

GAAAATTTAAGC

Flanking Amino Acid:

DVHVNVVDPKDVTLDLVELT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

70.7

0.51

0.9

61.7

35.7

Major PPT

87.4

0.84

0.8

80.5

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

46.2

-0.3

1.8

51.19

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044986

6837718 - 6842699

4982

ENSAPLT00000029177

6833654 - 6842699

9046