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Intron Name: Anas_platyrhynchos_platyrhynchos_16_6866242_6866574_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6866242 - 6866574

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTGTCTTCA

5'SS Class:

weak_major

3'SS Sequence:

AGTATGGCGAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

ATCTTTTTGAGT

Flanking Amino Acid:

NIKSFILLNIYDLLFKDTTQ

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.05

1.1

52.8

34.3

Major BPS

82.1

0.8

71.6

36.4

Major PPT

-0.1

1.2

41.1

42.7

Minor 5ss

48.5

-0.1

2.3

59.7

40.3

Minor BPS

56.6

0.29

1.6

71.91

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039793

6866109 - 6868780

2672