Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_6954789_6955976_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6954789 - 6955976

Intron Length:

1188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTCAGTGAT

5'SS Class:

major

3'SS Sequence:

TGGACTATAATAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTAGAT

Flanking Amino Acid:

KEEPVSGKLKLYSILATDNL

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

75.1

35.1

Major BPS

100

1.24

0.5

100

Major PPT

57.6

0.17

41.5

Minor 5ss

31.5

-2.1

3.2

41.3

39.2

Minor BPS

63.3

0.5

1.9

87.06

37.9

Associated Gene:

Gene:

EIF4ENIF1

Ensembl Gene ID:

ENSAPLG00000004503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004665

6937824 - 6957506

19683