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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7006203_7007050_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7006203 - 7007050

Intron Length:

848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGTGCTGG

5'SS Class:

weak_major

3'SS Sequence:

AGGGACAGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

TTATTTGTAAGG

Flanking Amino Acid:

DLGTLGTNTGLINKYQ*

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.1

0.12

1.1

39.9

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

46.2

-0.2

1.1

32.8

40.6

Minor 5ss

46.5

-0.4

2.8

60.5

45.6

Minor BPS

47.1

-0.3

2.3

58.9

43.5

Associated Gene:

Gene:

PIK3IP1

Ensembl Gene ID:

ENSAPLG00000003911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027188

6999348 - 7007069

7722