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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7013161_7014979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7013161 - 7014979

Intron Length:

1819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

CTGTACTTAAGC

Flanking Amino Acid:

IFSFGIVLCEIIGQVYADPD

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.4

1.05

0.8

80.7

33.8

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

73.7

0.53

0.8

66.3

35.4

Minor 5ss

34.5

-1.8

2.8

42.4

44.3

Minor BPS

57.9

0.23

1.9

66.9

44.7

Associated Gene:

Gene:

LIMK2

Ensembl Gene ID:

ENSAPLG00000003115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003238

7012666 - 7043225

30560