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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7017760_7018031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7017760 - 7018031

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

ACTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TAGACCCTGACT

Flanking Amino Acid:

GTLKDFLRNADPFPWQQKVS

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

78.2

37.9

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

81.1

0.7

0.9

77.4

36.3

Minor 5ss

34.4

-1.8

2.8

43.3

43.8

Minor BPS

57.3

0.31

1.8

74.04

42.4

Associated Gene:

Gene:

LIMK2

Ensembl Gene ID:

ENSAPLG00000003115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003238

7012666 - 7043225

30560