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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7060215_7061193_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7060215 - 7061193

Intron Length:

979

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCGGCGCCC

5'SS Class:

weak_major

3'SS Sequence:

TTATTTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTAAAC

Flanking Amino Acid:

RRLGYAHPARRREVNGHDED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.7

0.02

1.3

49.8

38.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.7

0.6

74.3

39.2

Minor 5ss

20.9

-3.4

4.1

33.4

42.2

Minor BPS

67.7

0.53

1.4

75.88

33.9

Associated Gene:

Gene:

C12orf43

Ensembl Gene ID:

ENSAPLG00000018598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032630

7060036 - 7063140

3105