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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7062443_7062791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7062443 - 7062791

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

ATTGCCTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TATAACATAATT

Flanking Amino Acid:

ASRRRQPSSSSDLDSDEEWQ

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.6

0.67

0.9

40.8

Minor 5ss

31.6

-2.1

3.2

41.1

45.6

Minor BPS

55.5

0.25

1.8

76.53

39.4

Associated Gene:

Gene:

C12orf43

Ensembl Gene ID:

ENSAPLG00000018598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038825

7059721 - 7063140

3420

ENSAPLT00000032630

7060036 - 7063140

3105