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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7066859_7067161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7066859 - 7067161

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGCC

5'SS Class:

major

3'SS Sequence:

TTCTTTCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

GTACCGCTAACT

Flanking Amino Acid:

ALTNLTPTKQAFTSDSETHT

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

66.9

37.4

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

84.3

0.77

0.7

77.9

Minor 5ss

37.2

-1.4

3.4

51.6

45.1

Minor BPS

48.3

-0

2.3

72.43

43.5

Associated Gene:

Gene:

HNF1A

Ensembl Gene ID:

ENSAPLG00000002580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002614

7065985 - 7080854

14870