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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7071146_7071890_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7071146 - 7071890

Intron Length:

745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CATTGTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTCCCCTCCATT

Flanking Amino Acid:

PSALSPSKVHGVRYNQQPAS

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

67.6

0.4

1.1

61.2

44.3

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

0.11

73.49

43.7

Associated Gene:

Gene:

HNF1A

Ensembl Gene ID:

ENSAPLG00000002580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002614

7065985 - 7080854

14870