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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7179061_7180805_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7179061 - 7180805

Intron Length:

1745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCGGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

GGTCTTTCACTT

Flanking Amino Acid:

LNGDGRVDFEEFVRMMSR*

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

77.7

0.69

30.2

Major PPT

75.6

0.58

69.1

41.8

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

44.7

-0.3

1.7

58.52

38.9

Associated Gene:

Gene:

CABP1

Ensembl Gene ID:

ENSAPLG00000015765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016449

7178035 - 7204082

26048