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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7182847_7183516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7182847 - 7183516

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTT

5'SS Class:

strong_major

3'SS Sequence:

TCCACTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TCTTTTTGGATC

Flanking Amino Acid:

DRELRPEEIEELREAFKEFD

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.9

36.7

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

71.2

0.48

0.8

64.4

30.9

Minor 5ss

37.2

-1.4

3.4

56.5

47.6

Minor BPS

55.1

0.14

1.4

64.86

35.5

Associated Gene:

Gene:

CABP1

Ensembl Gene ID:

ENSAPLG00000015765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016449

7178035 - 7204082

26048