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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7232849_7233025_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7232849 - 7233025

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

AGCTCAAGGAAT

Flanking Amino Acid:

LTLLQNCTNEEERQRIRQSV

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

71.9

34.5

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

84.7

0.78

0.7

79.6

25.9

Minor 5ss

35.6

-1.6

2.8

36.8

40.4

Minor BPS

39.7

-0.7

1.9

54.73

Associated Gene:

Gene:

POP5

Ensembl Gene ID:

ENSAPLG00000015761

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031467

7231406 - 7233141

1736

ENSAPLT00000016423

7231406 - 7233141

1736