Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_7244030_7245030_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7244030 - 7245030

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCAGTTGT

5'SS Class:

major

3'SS Sequence:

TGTGCTGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAC

U12 Branch Point Sequence:

ATAACTTGTACT

Flanking Amino Acid:

LVNWDFVEQVRICSHEVPSC

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

71.5

41.1

Major BPS

65.6

0.39

1.1

67.7

34.6

Major PPT

76.8

0.6

73.1

42.1

Minor 5ss

37.5

-1.4

2.8

47.4

43.2

Minor BPS

0.01

1.8

69.06

41.5

Associated Gene:

Gene:

RNF10

Ensembl Gene ID:

ENSAPLG00000015268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015941

7235901 - 7252950

17050