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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7261632_7262108_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7261632 - 7262108

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

AAAACAAATGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAA

Flanking Amino Acid:

TLLVDVAGGTGDIAFRFINY

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

51.6

0.04

1.1

42.2

41.3

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

69.4

0.6

1.3

77.65

32.3

Associated Gene:

Gene:

COQ5

Ensembl Gene ID:

ENSAPLG00000015103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015764

7260916 - 7268683

7768