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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7274943_7277438_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7274943 - 7277438

Intron Length:

2496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTCT

5'SS Class:

major

3'SS Sequence:

AGCCATTGAGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TTTTGCTGATAA

Flanking Amino Acid:

KVEEYFVAPPGSVFICCPER

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

67.6

37.9

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

52.2

0.05

47.6

39.5

Minor 5ss

45.5

-0.5

3.1

65.8

45.4

Minor BPS

48.3

-0.1

2.2

69.67

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046699

7274902 - 7278243

3342