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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7277543_7277917_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7277543 - 7277917

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGAGG

5'SS Class:

major

3'SS Sequence:

CTTTGTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

AAGCCAGCAACC

Flanking Amino Acid:

VEPMDSVLEDRSLYLREDDV

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

64.3

47.1

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

85.1

0.79

0.8

37.3

Minor 5ss

37.2

-1.4

3.1

48.8

Minor BPS

40.2

-0.7

2.2

49.41

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046699

7274902 - 7278243

3342