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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7282199_7282753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7282199 - 7282753

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCCG

5'SS Class:

major

3'SS Sequence:

CTTCTTCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTTAT

U12 Branch Point Sequence:

CTTCTTCCAACA

Flanking Amino Acid:

PYTHLRIRTKPFPWGDGNKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

58.1

46.4

Major BPS

66.2

0.4

1.3

57.4

49.1

Major PPT

77.8

0.63

0.8

73.7

29.9

Minor 5ss

-2.3

3.4

39.4

Minor BPS

-0.2

1.8

61.19

Associated Gene:

Gene:

COX6A1

Ensembl Gene ID:

ENSAPLG00000014977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015599

7282112 - 7283109

998