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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7345801_7347369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7345801 - 7347369

Intron Length:

1569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCCCC

5'SS Class:

major

3'SS Sequence:

TTCTGTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

GCTGCAGTAACA

Flanking Amino Acid:

DAFMLGIGMLGYPGFQAATY

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

1.1

60.6

44.5

Major BPS

54.4

0.11

1.2

36.4

Major PPT

80.3

0.68

0.8

72.8

37.5

Minor 5ss

38.7

-1.3

44.2

43.2

Minor BPS

46.5

-0.2

2.3

60.92

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028040

7331498 - 7351671

20174