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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7417127_7418662_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7417127 - 7418662

Intron Length:

1536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TGTTACTGAGTC

Flanking Amino Acid:

LWHPECFVCRECFTPFINGS

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

75.1

35.1

Major BPS

71.4

0.53

1.2

63.4

Major PPT

0.68

0.7

73.6

24.6

Minor 5ss

33.3

-1.9

2.9

35.7

40.8

Minor BPS

49.7

-0

1.9

65.53

39.7

Associated Gene:

Gene:

PXN

Ensembl Gene ID:

ENSAPLG00000012909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030120

7413768 - 7418929

5162

ENSAPLT00000013484

7412753 - 7418929

6177