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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7448324_7449330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7448324 - 7449330

Intron Length:

1007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGGCAA

U12 Branch Point Sequence:

TGGACTCTAGTG

Flanking Amino Acid:

ALSTLNTHGKDNVNSLLPVF

Intron Amino Acid Position:

1290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

43.3

-0.4

1.5

49.1

46.3

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

42.8

-0.6

1.9

45.41

41.3

Associated Gene:

Gene:

GCN1

Ensembl Gene ID:

ENSAPLG00000010927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011518

7423151 - 7467106

43956