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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7454568_7455312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7454568 - 7455312

Intron Length:

745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TGTTTTGTAACA

Flanking Amino Acid:

DGLFDDLWRIRFSSVQLLGD

Intron Amino Acid Position:

1832

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

30.2

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

78.4

0.64

72.8

42.2

Minor 5ss

40.5

-1.1

3.2

57.3

47.4

Minor BPS

60.6

0.33

75.16

36.6

Associated Gene:

Gene:

GCN1

Ensembl Gene ID:

ENSAPLG00000010927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011518

7423151 - 7467106

43956