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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7461009_7461549_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7461009 - 7461549

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

TTATCACTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CAATCTCTGACT

Flanking Amino Acid:

GIRSSDDSAIRDTMLQALRF

Intron Amino Acid Position:

2401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

70.4

42.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

75.7

0.58

0.9

67.4

39.1

Minor 5ss

36.1

-1.6

3.3

46.8

48.5

Minor BPS

54.5

0.22

1.7

69.37

41.5

Associated Gene:

Gene:

GCN1

Ensembl Gene ID:

ENSAPLG00000010927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011518

7423151 - 7467106

43956