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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7464673_7466133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7464673 - 7466133

Intron Length:

1461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCATTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAA

U12 Branch Point Sequence:

TATATCTGAATT

Flanking Amino Acid:

PPKLSNLFIKCLQNSSSDIK

Intron Amino Acid Position:

2557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

70.7

0.51

0.9

61.7

35.7

Major PPT

79.9

0.67

0.9

78.2

35.3

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

64.6

0.54

1.4

78.74

37.1

Associated Gene:

Gene:

GCN1

Ensembl Gene ID:

ENSAPLG00000010927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011518

7423151 - 7467106

43956