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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7484528_7485081_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7484528 - 7485081

Intron Length:

554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

GTGGTCTGACCT

Flanking Amino Acid:

SAKENINVEEMFNCITELVL

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

75.8

Major BPS

0.65

1.1

77.4

37.3

Major PPT

86.7

0.83

0.8

81.1

30.9

Minor 5ss

37.3

-1.4

47.4

47.9

Minor BPS

47.7

-0.1

1.8

64.76

45.7

Associated Gene:

Gene:

RAB35

Ensembl Gene ID:

ENSAPLG00000029700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045798

7474006 - 7485210

11205