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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7500439_7504264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7500439 - 7504264

Intron Length:

3826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

GGTTTCACACCT

Flanking Amino Acid:

QNVLDGADSTVTLLSVEMTT

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.3

42.2

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

68.2

0.41

0.9

33.8

Minor 5ss

28.6

-2.5

2.8

41.8

Minor BPS

45.6

-0.2

66.64

43.5

Associated Gene:

Gene:

BICDL1

Ensembl Gene ID:

ENSAPLG00000010709

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011156

7492671 - 7540379

47709