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Intron Name: Anas_platyrhynchos_platyrhynchos_16_7588172_7591599_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7588172 - 7591599

Intron Length:

3428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATACCTG

5'SS Class:

major

3'SS Sequence:

GCCACAACCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TCTGCCACAACC

Flanking Amino Acid:

SRKLQEIKEQEYQAQVEEMR

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

58.6

45.9

Major BPS

65.3

0.38

71.6

30.1

Major PPT

56.1

0.14

0.9

46.7

34.2

Minor 5ss

46.9

-0.3

2.9

64.4

Minor BPS

51.8

0.03

67.67

43.9

Associated Gene:

Gene:

CIT

Ensembl Gene ID:

ENSAPLG00000009657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022538

7562782 - 7633898

71117

ENSAPLT00000010123

7562782 - 7633898

71117

ENSAPLT00000045146

7562782 - 7633442

70661